Job Description P75693 Confidence 0.80% Date Thu Jan 5 12:13:12 GMT 2012 Rank 71 Aligned Residues 80 % Identity 13% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	V	L	T	G	L	G	V	A	L	G	D	A	F	Y	S	G	L	G	L	F	G	L	A	T	L	I	T	Q	C	E	E	I	F	S	L	I	R	I	V	G	G	A	Y	L	L	W	F	A	W	C	S	M	R	R	Q	S	T	P	Q	M	S	T	L	Q	Q	P	I	S	A	P	W	Y	V	F	F	R	R
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	.	.	.	.	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I
Template Known Secondary structure			S																						T	T						.	.	.	.						T																			S	S	T	T						T	T		S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		131	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions