Job Description P75693 Confidence 0.76% Date Thu Jan 5 12:13:12 GMT 2012 Rank 77 Aligned Residues 161 % Identity 7% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	R	A	G	V	L	T	G	L	G	V	A	L	G	D	A	F	Y	S	G	L	G	L	F	G	L	A	T	L	I	T	Q	C	E	E	I	F	S	L	I	R	I	V	G	G	A	Y	L	L	W	F	A	W	C	S	M	R	R	Q	S	T	P	Q	M	S	T	L	Q	Q	P	I	S	A	P	W	Y	V	F	F
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		G	P	F	S	L	A	A	I	W	F	A	M	A	I	Q	V	A	I	F	I	A	A	G	Q	M	T	S	S	F	.	.	.	Q	V	W	Q	V	I	V	A	I	A	A	G	C	T	I	A	V	I	L	L	F	F	T	Q	S	A	A	I	R	W	G	I	N	F	T	V	A	A	R	M	P	F	G	I	R	G	S	L
Template Known Secondary structure																S	T										T	T	T	S	.	.	.																								T														T	T	T	T	S		T	T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	G	L	I	T	D	L	S	N	P	Q	T	V	L	F	F	I	S	I	F	S	V	T	L	N	A	E	T	P	T	W	A	R	L	M	A	W	A	G	I	V	L	A	S	I	I	W	R	V	F	L	S	Q	A	F	S	L	P	A	V	R	R	A	Y	G	R	M	Q	R	V	A	S	R	V	I	G	A	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	I	T	L	K	A	L	L	S	L	F	W	F	G	F	Q	T	W	L	G	A	L	A	L	D	E	I	T	R	L	L	T	G	F	T	N	L	P	L	W	I	V	I	F	G	A	I	Q	V	V	T	T	F	Y	G	I	T	F	I	R	W	M	N	V	F	A	S	P	V	L	L	A	M	G	V	Y	M	V	Y
Template Known Secondary structure																																																							T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		209	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions