Job Description P76034 Confidence 95.25% Date Thu Jan 5 12:17:34 GMT 2012 Rank 198 Aligned Residues 59 % Identity 17% Template d2oz6a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.												.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	S	R	Q	Q	T	I	L	Q	M	V	I	D	Q	G	.	.	.	.	.	.	.	.	.	.	.	Q	V	S	V	T	D	L	A	K	A	T	G	V	S	E	V	T	I	R	Q	D	L	N	T	L	E	K	L	S	Y	L	R	R	A	H	G	F	A	V	S	L	D	S
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	G	R	V	A	R	T	L	L	D	L	C	Q	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	R	I	V	G	C	S	R	E	M	V	G	R	V	L	K	S	L	E	E	Q	G	L	V	H	V	K	G	K	T	M	V	V	F	G	T
Template Known Secondary structure														T	T	S	T	T					T	T																T	S															T	T	S					T	T						T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions