Return to main results Retrieve Phyre Job Id

Job DescriptionP76034
Confidence99.93%DateThu Jan 5 12:17:34 GMT 2012
Rank3Aligned Residues128
% Identity17%Templated1uj4a1
SCOP infoNagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), catalytic domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  MSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESM
Query Conservation        
  

  

  
  
  



 


   

  
        
 


   
  
      
 
 

         
Alig confidence 










































.






..............














Template Conservation        
  

  

 

 

  
 

 


   

  
    .      
..............   
           
Template Sequence  RPLESYKKEAAHAAIAYVQDGXVVGLGTGSTARYAVLELARRL. REGELKG. . . . . . . . . . . . . . VVGVPTSRATEELAK
Template Known Secondary structure 
TTTT

TT


S.TTSS
S..............
SS
Template Predicted Secondary structure 









.





..............


Template SS confidence 















































































   3......10.........20.........30.........40..... ....50.. .......60.......
 
   147..150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 



























Query SS confidence 






























































Query Sequence  VGPLTRQCIQQVHFSKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAV
Query Conservation   
  
   
     
 



  

    
 
      
  

  
  
   


 
 

    
Alig confidence 






























































Template Conservation   
      
     
 

 
  


   
            
 
   
   




 

 
  
Template Sequence  REGIPLVDLPPEGVDLAIDGADEIAPGLALIKGXGGALLREKIVERVAKEFIVIADHTKKVPV
Template Known Secondary structure  TT

B



TT


SGGG

TTS
TGGGB
S
Template Predicted Secondary structure 

























Template SS confidence 






























































   68.70.........80.........90.........100.........110.........120.........130
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions