 |
Job Description | P76034 | Confidence | 97.36% | Date | Thu Jan 5 12:17:34 GMT 2012 |
Rank | 70 | Aligned Residues | 51 |
% Identity | 12% | Template | d1r1ua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ArsR-like transcriptional regulators
|
Resolution | 2.00 |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | R | Q | Q | T | I | L | Q | M | V | I | D | Q | G | Q | V | S | V | T | D | L | A | K | A | T | G | V | S | E | V | T | I | R | Q | D | L | N | T | L | E | K | L | S | Y | L | R | R | A | H | G | F |
Query Conservation |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |   |
|   |   | . |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|
Template Sequence |   |
D | Y | N | R | I | R | I | M | E | L | L | S | V | . |
S | E | A | S | V | G | H | I | S | H | Q | L | N | L | S | Q | S | N | V | S | H | Q | L | K | L | L | K | S | V | H | L | V | K | A | K | R | Q | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|