Return to main results Retrieve Phyre Job Id

Job DescriptionP76034
Confidence96.60%DateThu Jan 5 12:17:34 GMT 2012
Rank133Aligned Residues46
% Identity20%Templated1lj9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50
Predicted Secondary structure 








Query SS confidence 













































Query Sequence  QQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRA
Query Conservation     

  
   
 
 
  

    

  





  

  
 
 
 
Alig confidence 













































Template Conservation 
   
  
      
  


  
 
   


  
  
   
 
 
 
Template Sequence  QYLYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQ
Template Known Secondary structure  STTT

TTS
Template Predicted Secondary structure 







Template SS confidence 













































   32.......40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions