Return to main results Retrieve Phyre Job Id

Job DescriptionP76034
Confidence96.03%DateThu Jan 5 12:17:34 GMT 2012
Rank168Aligned Residues51
% Identity16%Templatec3r4kD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20.........30.........40.........50...
Predicted Secondary structure  .










Query SS confidence 









.








































Query Sequence  SRQQTILQMV. IDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGF
Query Conservation 

   

  
.   
 
 
  

    

  





  

  
 
 
  

Alig confidence 









.








































Template Conservation   
 
 


 

      

 


  


  

  


 

   
 
 
    
Template Sequence  SKALTLLTYFNHGRLEIGLSDLTRLSGXNKATVYRLXSELQEAGFVEQVERS
Template Known Secondary structure  TT
BTTBS

S
TTS



Template Predicted Secondary structure 
















Template SS confidence 



















































   5....10.........20.........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions