Job Description P76034 Confidence 97.09% Date Thu Jan 5 12:17:34 GMT 2012 Rank 83 Aligned Residues 150 % Identity 13% Template c3eh7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: the structure of a putative 4-hydroxybutyrate coa-transferase from2 porphyromonas gingivalis w83 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		M	M	S	N	Y	T	L	K	R	E	L	A	E	F	A	A	S	L	V	Q	P	G	E	T	I	F	I	E	N	G	S	S	.	N	A	L	L	A	R	T	L	G	E	Q	K	K	N	V	T	I	I	T	V	S	S	Y	I	A	H	L	L	K	D	A	P	C	E	V	I	L	L	G	G	V	Y	Q	K	K	S	E
Query Conservation																																		.
Alig confidence																																		.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	E	Y	A	S	R	I	V	S	A	E	E	A	V	K	H	I	K	N	G	E	R	V	A	L	S	H	A	A	G	V	P	Q	S	C	V	D	A	L	V	Q	Q	A	D	L	F	V	E	I	Y	H	X	L	C	L	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	A	D	F	I	P	V
Template Known Secondary structure		T	T	G	G	G	G	G	G									T	T			T	T								G	G	G												S	T	T	T								B		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.														.	.	.	.	.	.	.	70
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	V	G	P	L	T	R	Q	C	I	Q	Q	V	H	F	S	K	A	F	I	G	I	D	G	W	Q	P	E	T	G	F	T	G	R	D	M	M	R	T	D	V	V	N	A	V	L	E	K	E	C	E	A	I	V	L	T	D	S	S	K	F	G	A	V	H	S	Y	S	I	G	P	V	E	R	F	N	R	V	I
Query Conservation
Alig confidence																													.											.																				.
Template Conservation																													.											.																				.
Template Sequence		F	F	Y	E	V	P	S	X	I	R	K	D	I	L	H	I	D	V	A	I	V	Q	L	S	X	P	D	.	E	N	G	Y	C	S	F	G	V	S	.	C	D	Y	S	K	P	A	A	E	S	A	H	L	V	I	G	E	I	N	.	R	Q	X	P	Y	V	H	G	D	N	L	I	H	I	S	K	L	D	Y	I	V
Template Known Secondary structure			G	G	G							T	T	S	S			S											.	T	T	S					T	T	B	.		T	T									S								.	T	T	S						S					G	G	G		S
Template Predicted Secondary structure																													.											.																				.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	S	K	I	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	D	Y	P	I	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions