Job Description P76034 Confidence 96.95% Date Thu Jan 5 12:17:34 GMT 2012 Rank 94 Aligned Residues 90 % Identity 14% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.																																			.
Query SS confidence																.																																			.
Query Sequence		S	R	Q	Q	T	I	L	Q	M	V	I	D	Q	G	.	Q	V	S	V	T	D	L	A	K	A	T	G	V	S	E	V	T	I	R	Q	D	L	N	T	L	E	K	L	S	Y	L	R	R	A	.	H	G	F	A	V	S	L	D	S	D	D	V	E	T	R	M	M	S	N	Y	T	L	K	R	E	L	A	E	F	A
Query Conservation																.																																			.
Alig confidence																.																																			.
Template Conservation
Template Sequence		A	R	A	A	S	I	M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	E	E	E	F	L	V	E	A	L	G	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I	L	S	L	V	K	P	Y	L
Template Known Secondary structure															T	T		B									S	S															T	T	T	S					S	S	S	S						T								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		81	.	.	.	.	.		.	.	.	90	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	S	L	V	Q	P	.	G	E	T	I	F	I
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		R	S	L	A	E	E	L	D	E	S	V	S	L
Template Known Secondary structure								S		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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