 |
Job Description | P76034 | Confidence | 78.91% | Date | Thu Jan 5 12:17:34 GMT 2012 |
Rank | 423 | Aligned Residues | 36 |
% Identity | 14% | Template | c2jpcA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:ssrb; |
PDBTitle: ssrb dna binding protein
|
Resolution | UNK |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | Q | T | I | L | Q | M | V | I | D | Q | G | Q | V | S | V | T | D | L | A | K | A | T | G | V | S | E | V | T | I | R | Q | D | L | N | T | L |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |   |   |
| . | . |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
Template Sequence |   |
R | E | R | Q | V | L | K | L | I | D | . |
. |
E | G | Y | T | N | H | G | I | S | E | K | L | H | I | S | I | K | T | V | E | T | H | R | M | N | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | T | S |
|
| S |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|