Job Description P76034 Confidence 97.70% Date Thu Jan 5 12:17:34 GMT 2012 Rank 46 Aligned Residues 78 % Identity 17% Template c2du9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum Resolution 2.28 Å

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		5	.	.	.	.	10	.	.	.	.	.										.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.				.																																			.
Query SS confidence													.	.	.	.	.	.	.	.	.				.																																			.
Query Sequence		Q	Q	T	I	L	Q	M	V	I	D	Q	.	.	.	.	.	.	.	.	.	G	Q	V	.	S	V	T	D	L	A	K	A	T	G	V	S	E	V	T	I	R	Q	D	L	N	T	L	E	K	L	S	Y	L	R	R	A	H	G	.	F	A	V	S	L	D	S	D	D	V	E	T	R	M	M	S	N	Y	T	L	K
Query Conservation													.	.	.	.	.	.	.	.	.				.																																			.
Alig confidence													.	.	.	.	.	.	.	.	.				.																																			.
Template Conservation
Template Sequence		Y	K	Q	I	A	S	L	I	E	D	S	I	V	D	G	T	L	S	I	D	Q	R	V	P	S	T	N	E	L	A	A	F	H	R	I	N	P	A	T	A	R	N	G	L	T	L	L	V	E	A	G	I	L	Y	K	K	R	G	I	G	X	F	V	S	A	Q	A	P	A	L	I	R	E	R	R	D	A	A	F	A
Template Known Secondary structure															S	S	S	S		T	T													S																	T	T	S					T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		74	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	A	E	F	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Y	V	A	P	L	I	D
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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