Job Description P76034 Confidence 84.26% Date Thu Jan 5 12:17:34 GMT 2012 Rank 352 Aligned Residues 45 % Identity 9% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.								.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		Q	Q	T	I	L	Q	M	V	I	D	Q	G	.	.	.	.	.	.	.	Q	V	S	V	T	D	L	A	K	A	T	G	V	S	E	V	T	I	R	Q	D	L	N	T	L	E	K	L	S	Y	L	R	R
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	K	L	V	D	L	I	G	D	N	P	G	S	D	L	L	R	L	T	Q	I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	V	L	Q	N	C	V	D	E	G	D	L	L	I
Template Known Secondary structure												S		S	B											T	S		T	T																			T	S
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions