Job Description P0A7A5 Confidence 97.61% Date Thu Jan 5 11:05:12 GMT 2012 Rank 302 Aligned Residues 112 % Identity 15% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		V	A	R	M	T	E	L	L	E	L	T	P	Q	S	R	V	L	E	I	G	T	G	S	G	Y	Q	T	A	I	L	A	.	.	H	L	V	Q	H	V	C	S	V	E	R	I	K	G	L	Q	W	Q	A	R	R	R	L	K	N	L	D	L	H	N	V	S	T	R	H	G	D	G	W	Q	G	W	Q	A	R	A	P
Query Conservation																																	.	.
Alig confidence																																	.	.																						.																								.
Template Conservation																																																								.																								.
Template Sequence		L	R	W	L	V	E	R	R	F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	Q	L	.	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	E	.	C
Template Known Secondary structure								T	T	S											T		T	T								T	T		T	T											S	T	T	S						.			B	T	T	G	G	G						S			T	T	S	S				.
Template Predicted Secondary structure																																																								.																								.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.
		142	.	.	.	.	.	.	.	150	.													.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		F	D	A	I	I	V	T	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	P	E	I	P	T	A	L	M	T	Q	L	D	E	G	.	G	I	L	V	L	P	V	G	E	E	H	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		C	D	T	L	L	C	D	I	G	E	S	S	S	S	A	E	V	E	E	H	R	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	E	F	C	V	K	V	L	C	P	Y	M
Template Known Secondary structure			S											S																					T	T										S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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