Job Description P0A7A5 Confidence 98.85% Date Thu Jan 5 11:05:12 GMT 2012 Rank 269 Aligned Residues 122 % Identity 16% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																					.	.	.	.																													.	.	.	.	.																								.
Query SS confidence																					.	.	.	.																													.	.	.	.	.																								.
Query Sequence		G	Q	G	Q	T	I	S	Q	P	Y	M	V	A	R	M	T	E	L	L	.	.	.	.	E	L	T	P	Q	S	R	V	L	E	I	G	T	G	S	G	Y	Q	T	A	I	L	A	H	L	V	Q	H	.	.	.	.	.	V	C	S	V	E	R	I	K	G	L	Q	W	Q	A	R	R	R	L	K	N	L	D	L	.
Query Conservation																					.	.	.	.																													.	.	.	.	.																								.
Alig confidence																					.	.	.	.																													.	.	.	.	.																								.
Template Conservation
Template Sequence		K	A	G	E	F	Y	T	P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P
Template Known Secondary structure			S	B																		T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
			123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.																														.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.
Predicted Secondary structure		.																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	H	N	V	S	T	R	H	G	D	G	W	Q	G	W	Q	A	R	A	P	.	.	.	F	D	A	I	I	V	T	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	I	P	T	A	L	M	T	Q	L	D	E	.	G	G	I	L
Query Conservation		.																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.																				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		I	E	N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X
Template Known Secondary structure		G	G	G						S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		169	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	V	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	V	L	P	H
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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