Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7A5
Confidence98.76%DateThu Jan 5 11:05:12 GMT 2012
Rank274Aligned Residues104
% Identity18%Templatec3douA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal rna large subunit methyltransferase j; PDBTitle: crystal structure of methyltransferase involved in cell2 division from thermoplasma volcanicum gss1
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 



































..
Query SS confidence 













































































. .
Query Sequence  LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA. .
Query Conservation 
 

 





 


  
  

     
  

        
       
   
     
          

 
     ..
Alig confidence 













































































..
Template Conservation     
  









 
  
      
 
 

                                     



 
    
Template Sequence  VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEXEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAXAK
Template Known Secondary structure  S
TT
S
TT
TTT
SSS




TT


TTSSST
SS




Template Predicted Secondary structure 






































Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   151........160.........170......
Predicted Secondary structure  ...............









Query SS confidence  . . . . . . . . . . . . . . .

























Query Sequence  . . . . . . . . . . . . . . . PPEIPTALMTQLDEGGILVLPVGEEH
Query Conservation  ...............           
 


 

  
    
Alig confidence  ...............

























Template Conservation    
    
      
       
   

 

  
 
 
   
Template Sequence  VSGIPSRDHAVSYQIGQRVXEIAVRYLRNGGNVLLKQFQGD
Template Known Secondary structure 

S

ST
Template Predicted Secondary structure 











Template SS confidence 








































   116...120.........130.........140.........150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions