Job Description P0A7A5 Confidence 99.51% Date Thu Jan 5 11:05:12 GMT 2012 Rank 168 Aligned Residues 114 % Identity 20% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																											.	.
Query SS confidence																																						.																											.	.
Query Sequence		P	Y	M	V	A	R	M	T	E	L	L	E	L	T	P	Q	S	R	V	L	E	I	G	T	G	S	G	Y	Q	T	A	I	L	A	H	L	.	V	Q	H	V	C	S	V	E	R	I	K	G	L	Q	W	Q	A	R	R	R	L	K	N	L	D	L	.	.	H	N	V	S	T	R	H	G	D	G	W	Q	G	W	Q
Query Conservation																																						.																											.	.
Alig confidence														.	.																							.																											.	.
Template Conservation														.	.
Template Sequence		Q	R	D	S	R	L	A	T	R	R	Y	V	.	.	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R
Template Known Secondary structure		G												.	.	T	T							T		T	T	T									T	T		S							S															T	T			G	G	G						S
Template Predicted Secondary structure														.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		138					.	140	.	.	.	.	.	.	.	.																.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	R	A	P	F	D	A	I	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	P	P	E	I	P	T	A	L	M	T	Q	L	D	E	G	G	I	L	V	L	P	V	G	E	E	H
Query Conservation			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L
Template Known Secondary structure						T	T											S	S		S	S	T	T		S	S	S				T												T														T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions