Job Description P0A7A5 Confidence 99.10% Date Thu Jan 5 11:05:12 GMT 2012 Rank 249 Aligned Residues 112 % Identity 21% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																						.	.																									.	.	.	.
Query SS confidence																																						.	.																									.	.	.	.
Query Sequence		M	V	A	R	M	T	E	L	L	E	L	T	P	Q	S	R	V	L	E	I	G	T	G	S	G	Y	Q	T	A	I	L	A	H	L	V	Q	.	.	H	V	C	S	V	E	R	I	K	G	L	Q	W	Q	A	R	R	R	L	K	N	L	D	L	.	.	.	.	H	N	V	S	T	R	H	G	D	G	W	Q	G	W
Query Conservation																																						.	.																									.	.	.	.
Alig confidence															.																							.	.																									.	.	.	.
Template Conservation															.
Template Sequence		X	I	T	H	L	P	L	C	S	I	P	N	P	.	K	K	V	L	V	I	G	G	G	D	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L
Template Known Secondary structure				T					T	T	S	S	S		.							S		S	S	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S
Template Predicted Secondary structure															.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
				137	.	.	140	.	.	.	.	.	.	.	.	.	150	.											.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Q	A	R	A	P	F	D	A	I	I	V	T	A	A	P	.	.	.	.	.	.	.	.	.	.	P	E	I	P	T	A	L	M	T	Q	L	D	E	G	G	I	L	V	L	P	V	G	E	E
Query Conservation		.	.																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	A	A	E	G	S	Y	D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	R	A	L	R	P	G	G	V	V	C	T	Q	A	E	S	L
Template Known Secondary structure			S	S		S	S												S	S	S	G	G	G	G	G	G	S																								T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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