 |
Job Description | P0A7A5 | Confidence | 61.83% | Date | Thu Jan 5 11:05:12 GMT 2012 |
Rank | 486 | Aligned Residues | 57 |
% Identity | 18% | Template | c1n7gB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:gdp-d-mannose-4,6-dehydratase; |
PDBTitle: crystal structure of the gdp-mannose 4,6-dehydratase2 ternary complex with nadph and gdp-rhamnose.
|
Resolution | 2.20 Å |
|
 |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | V | L | E | I | G | T | G | S | G | Y | Q | . |
. |
. |
. |
T | A | I | L | A | H | L | V | Q | H | V | C | S | V | E | R | I | K | G | L | Q | W | Q | A | R | R | R | L | K | N | L | D | L | H | N | V | S | T | R | H | G | D | G | W | Q |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|
|
|   |   | . | . | . | . |
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
| . |
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
Template Sequence |   |
K | I | A | L | I | T | G | I | . |
T | G | Q | D | G | S | Y | L | T | E | F | L | L | G | K | G | Y | E | V | H | G | L | I | R | R | S | S | N | F | N | T | Q | R | I | N | H | I | Y | I | D | K | A | L | M | K | L | H | Y | A | D | L | T | D |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T | . | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
|
|
| S | S |
|
|
| T | T | T |  |  |  |  |
|
|
|
| S |  |  |  |  |  |
|
| T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|