Return to main results Retrieve Phyre Job Id

Job DescriptionP0A978
Confidence41.20%DateThu Jan 5 11:09:33 GMT 2012
Rank63Aligned Residues64
% Identity22%Templated2ahob2
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Predicted Secondary structure 








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Query Sequence  MSNKMTGLVKWFNADKGFGFITPDDG. . SKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV
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Template Sequence  EGEILIATVKQVFD. . . YGSYVSLDEYGGLQAFLPWSEVSNIR. DVLKENRKVIVKVIRVDRRKGTVDVS
Template Known Secondary structure  TT


T...TTTTTT
GGG


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TTTT
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   11........20.... .....30.........40.........50 .........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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