Job Description P0A978 Confidence 38.64% Date Thu Jan 5 11:09:33 GMT 2012 Rank 64 Aligned Residues 52 % Identity 25% Template c2b8kG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: 12-subunit rna polymerase ii Resolution 4.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	N	K	M	T	G	L	V	K	W	F	N	A	D	K	G	F	G	F	I	T	P	D	D	G	S	K	D	V	F	V	H	F	T	A	I	Q	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	R	T	L	N	E	N	Q	K	V	E	F	S	I	E	Q
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Conservation																.	.	.								.																																.
Template Sequence		K	G	E	V	V	D	G	T	V	V	S	C	S	Q	.	.	.	H	G	F	E	V	Q	V	.	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	.	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G
Template Known Secondary structure		T	T												T	.	.	.	T							.	T	T	S						G	G	G	S		S	S				B	S	S		S	S						S	S	.					T	T
Template Predicted Secondary structure																.	.	.								.																																.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions