Job Description P0AE78 Confidence 99.63% Date Thu Jan 5 11:22:44 GMT 2012 Rank 75 Aligned Residues 121 % Identity 33% Template c3kh5A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:protein mj1225; PDBTitle: crystal structure of protein mj1225 from methanocaldococcus2 jannaschii, a putative archaeal homolog of g-ampk. Resolution 2.10 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	V	R	D	I	M	I	P	R	S	Q	M	I	T	L	K	R	N	Q	T	L	D	E	C	L	D	V	I	I	E	S	A	H	S	R	F	P	V	I	S	E	D	K	D	H	I	E	G	I	L	M	A	K	D	L	L	P	F	M	R	S	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		V	R	V	M	K	I	A	Q	N	K	.	K	I	V	T	V	Y	P	T	T	T	I	R	K	A	L	M	T	M	N	E	N	K	Y	R	R	L	P	V	V	N	A	G	N	N	K	V	V	G	I	I	T	S	M	D	I	V	D	F	M	G	G	G	S	K	Y	N	L	I	R	E	K	H	E	R	N	F	L	A	A
Template Known Secondary structure			B	G	G	G	T	S			S	.					B		T	T	S	B																					T	T	T		B														T	T	T	S	G	G	G					T	T	S	T	T
Template Predicted Secondary structure												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	E	P	V	R	E	I	M	E	E	N	V	I	T	L	K	E	N	A	D	I	D	E	A	I	E	T	F	L	T	K	N	V	G	G	A	P	I	V	N	D	E	N	Q	L	I	S	L	I	T	E	R	D	V	I	R	A	L	L	D	K	I	D	E	N	E	V	I	D	D	Y	I	T	R	D	V	I	V	A
Template Known Secondary structure		T	T	S	B	G	G	G	T	S	B		S						T	T		B											T	T		S							T	T		B															G	G	G	S		T	T		B	S	G	G	G		B		S				B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																																																															132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	S	M	D	K	V	L	R	Q	A	V	V	V	P	E	S	K	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	G	E	R	L	K	D	V	A	R	T	M	V	R	N	G	F	R	R	L	P	V	V	S	E	G	R	L	V	G	I	I	T	S	T	D	F	I	K	L	L	G	S	D	W	A	F	N	H	M	Q	T	G	N	V	R	E	I	T	N	V	R	M	E	E	I	M	K	R	D	V	I	T	A	K	E	G	D	K
Template Known Secondary structure			T	T		B												T		S							T	T																T	S									S			T							B					S	B	S	S				B		T	T		B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	M	L	K	E	F	R	S	Q	R	Y	H	M	A	I	V	I	D	E	F	G	G	V	S	G	L	V	T	I	E	D	I	L	E	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	K	I	A	E	I	M	V	T	N	D	I	G	A	L	P	V	V	D	E	N	L	R	I	K	G	I	I	T	E	K	D	V	L	K	Y	F
Template Known Secondary structure													T									T	T		B											G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions