Job Description P0AE78 Confidence 99.71% Date Thu Jan 5 11:22:44 GMT 2012 Rank 69 Aligned Residues 118 % Identity 16% Template c2v8qE_ PDB info PDB header:transferase Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1; PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp Resolution 2.10 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	P	R	S	Q	M	I	T	L	K	R	N	Q	T	L	D	E	C	L	D	V	I	I	E	S	A	H	S	R	F	P	V	I	S	E	D	K	D	H	I	E	G	I	L	M	A	K	D	L	L	P	F	M	R	S	D	A	E	A	F	.	.	.	.	.	.	.	.	.	.	S	M	D	K	V	L	R	Q	A
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		I	G	T	Y	A	N	I	A	M	V	R	T	T	T	P	V	Y	V	A	L	G	I	F	V	Q	H	R	V	S	A	L	P	V	V	D	E	K	.	G	R	V	V	D	I	Y	S	K	F	D	V	I	N	L	A	A	E	K	T	Y	N	N	L	D	V	S	V	T	K	A	L	Q	H	R	S	H	Y	F	E	G	V
Template Known Secondary structure			S	B		S	S						T	T		B														S							T	T	.	S	B							G	G	G	T	G	G	G	G	G	S	S						S	S	B					G	G	G			S				S
Template Predicted Secondary structure																																							.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	P	E	S	K	R	V	D	R	M	L	K	E	F	R	S	Q	R	Y	H	M	A	I	V	I	D	E	F	G	G	V	S	G	L	V	T	I	E	D	I	L	E	L	I	V	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	C	Y	L	H	E	T	L	E	A	I	I	N	R	L	V	E	A	E	V	H	R	L	V	V	V	D	E	H	D	V	V	K	G	I	V	S	L	S	D	I	L	Q	A	L	V	L	T
Template Known Secondary structure						T	T	S	B												T		S							T	T	S	B																S	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions