Job Description P0AE78 Confidence 99.76% Date Thu Jan 5 11:22:44 GMT 2012 Rank 59 Aligned Residues 132 % Identity 14% Template c2pfiA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:chloride channel protein clc-ka; PDBTitle: crystal structure of the cytoplasmic domain of the human2 chloride channel clc-ka Resolution 1.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		A	D	Q	R	V	R	D	I	M	I	P	R	S	Q	M	I	T	L	K	R	N	Q	T	L	D	E	C	L	D	V	I	I	E	S	A	H	S	R	F	P	V	I	S	E	D	K	D	H	I	E	G	I	L	M	A	K	D	L	L	P	F	M	R	S	D	A	E	A	F	S	M	D	K	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence												.	.																																																														.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		H	H	V	R	V	E	H	F	M	N	.	.	H	S	I	T	T	L	A	K	D	T	P	L	E	E	V	V	K	V	V	T	S	T	D	V	T	E	Y	P	L	V	E	S	T	E	S	Q	I	L	V	G	I	V	Q	R	A	Q	L	V	Q	A	L	Q	A	G	H	Q	Q	C	L	Q	D	I	L	A	R	G	C	P
Template Known Secondary structure			S		B						B	.	.								T	T		B										T				S						S		T	T	T		B																					B							T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		543	.	.	.	.	.	.	550	.	.			.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	Q	A	V	V	V	P	E	S	K	R	V	D	R	M	L	K	E	F	R	S	Q	R	Y	H	M	A	I	V	I	D	E	F	G	G	V	S	G	L	V	T	I	E	D	I	L	E	L	I	V	G	E	I	E	D	E	Y	D	E	E
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		T	E	P	V	T	L	T	L	F	S	E	T	T	L	H	Q	A	Q	N	L	F	K	L	L	N	L	Q	S	L	F	V	T	S	.	R	G	R	A	V	G	C	V	S	W	V	E	M	K	K	A	I	S	N	L	T	N	P	P	A	P	K	E
Template Known Secondary structure			B								T	T		B											T	T		S							.	T	T																				S
Template Predicted Secondary structure																																			.
Template SS confidence
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660		.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions