|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
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. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
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. | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |
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|  |  |  |  |
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| . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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| . |
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. |
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Query Sequence |   |
L | R | D | G | D | K | L | P | H | R | H | V | F | N | G | M | G | Y | D | G | D | N | I | S | P | H | L | A | W | D | D | . |
. |
. |
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. |
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. |
. |
V | P | A | G | T | K | S | F | V | V | T | C | Y | D | P | D | A | P | T | G | S | G | . |
. |
. |
. |
. |
W | W | H | W | V | V | V | N | L | P | A | D | T | R |
Query Conservation |   |
|   |   |
|   |   |
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|   |   |   |   |   |   |   |
|   |
|   |
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|   |
|   |
|   |   | . | . | . | . | . | . | . | . |   |
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|   |   |   |   | . | . | . | . | . |   |   |
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|   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . |
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| . | . | . | . | . |
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Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |
Template Sequence |   |
V | A | M | G | N | T | L | P | T | E | K | A | R | . |
. |
. |
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. |
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. |
S | K | P | Q | F | Q | F | T | F | N | K | Q | M | Q | N | A | Y | V | P | Q | D | D | D | L | F | T | L | V | M | T | D | P | D | A | P | S | K | T | D | H | K | W | S | E | F | C | H | L | V | E | C | D | L | K | L | L | N | T |
Template Known Secondary structure |   |
 |
| S | S |
| B |
|
| G | G | G | G | S | . | . | . | . | . | . | . | . | . | S |
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|  |  |  |  |  |  |  | T | T |
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| S | S |
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|  |  |  |  |  |  |  | S | S | S | S |
| S | S |
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| T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
 |
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|  |  |
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
546 | . | . | . | 550 | . | . | . | . | . | . | . | . | |
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. | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
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. | 140 | . |
Predicted Secondary structure |   |
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|  |  |  |  |
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| . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
V | L | P | Q | G | F | G | S | G | L | V | A | M | P | D | G | V | L | Q | T | R | T | D | F | G | K | T | G | Y | D | G | A | A | P | P | K | G | E | . |
T | H | R | Y | I | F | T | V | H | A | L | D | I | E | R | I | D | V | D | E | G | A | S | G | A | M | . |
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V | G | F |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
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|   |
|   | . |   |
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|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . |
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| . |
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
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|   |
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|   |
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|   |   |
|
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
E | F | F | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | F | N | T | K | G | S | N | T | L | I | E | Y | M | G | P | A | P | P | K | G | S | G | P | H | R | Y | V | F | L | L | Y | K | Q | P | . |
K | G | V | D | S | S | K | F | S | K | I | K | D | R | P | N | W | G | Y | G | T | P | A | T | G | V | G | K |
Template Known Secondary structure |   |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
| T | T |
|  |  |  |  |
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| T | T | S |
|
|  |  |  |  |  |  |  |  |  |
|
| . | T | T |
|
| G | G | G | S |
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|
| S | B | G | G | G |
|
| S | S | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
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|
| . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |
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|  |  |  |  |  |  |  |  |
|
| . |
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|  |  |  |
Template SS confidence |   |
|
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  |   |
632 | . | . | . | . | |
|
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|
|
. | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | |
. | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . |
  |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
|
|
Query Sequence |   |
N | V | H | F | H | S | L | A | S | A | S | I | T | A | M | F |
Query Conservation |   |
|
|   |
|
|
|
|   |   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
| . |   | . |
|
|
|   |
|
|
Template Sequence |   |
W | A | K | E | N | N | L | . |
Q | . |
L | V | A | S | N | F |
Template Known Secondary structure |   |
 |  |  | T | T | T |
| . |  | . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |  | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
700 | . | . | . | . | . | . | |
. | |
. | . | 710 | . | . | . |
  |