Return to main results Retrieve Phyre Job Id

Job DescriptionP12994
Confidence99.65%DateThu Jan 5 11:33:12 GMT 2012
Rank10Aligned Residues105
% Identity21%Templated1qoua_
SCOP infoPEBP-like PEBP-like Phosphatidylethanolamine binding protein
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50........ .60.........70.........80..
Predicted Secondary structure 

































.....
















Query SS confidence 


















































. . . . .























Query Sequence  LRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTG. . . . . SGWWHWVVVNLPADTRVLPQGFGS
Query Conservation 
  
  

   
       
 
 

 
 
   
  


 


  




  .....    


  


     
  
   
Alig confidence 












.........








.


















.....
















.......
Template Conservation 
  
  
    
 .........  
 
    .      










          




 

      .......
Template Sequence  VYNGHELFPSAVT. . . . . . . . . STPRVEVHG. GDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDS. . . . . . .
Template Known Secondary structure 

TT
B

GGGSS.........S



.

TT

S
S
SSS
TT

TTSBG.......
Template Predicted Secondary structure 





.........



.


























.......
Template SS confidence 















































































   35....40....... ..50...... ...60.........70.........80.........90.......
 
   83......90.........100.........110.........120.........130.........140..
Predicted Secondary structure 






































Query SS confidence 



























































Query Sequence  GLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFN
Query Conservation         
  

 
  
  

 

 

 
  


 
 




   
 
        
  
Alig confidence  ............
















.





























Template Conservation  ............  
     
  
 
 

. 







 
       
  
    
   
Template Sequence  . . . . . . . . . . . . SFGKEVVSYEMPRPNIG. IHRFVFLLFKQKKRGVVCRDGFNTRKFTQE
Template Known Secondary structure  ............GGS







SS.

SS




SBT

Template Predicted Secondary structure  ............
















.














Template SS confidence 



























































   98.100.........110.... .....120.........130.........140....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions