Return to main results Retrieve Phyre Job Id

Job DescriptionP12994
Confidence6.89%DateThu Jan 5 11:33:12 GMT 2012
Rank18Aligned Residues16
% Identity44%Templatec3kmlB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:coat protein; PDBTitle: circular permutant of the tobacco mosaic virus
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........
Predicted Secondary structure 






Query SS confidence 















Query Sequence  LAWDDVPAGTKSFVVT
Query Conservation 
 
   
  


 


Alig confidence 















Template Conservation 
 
       


   
Template Sequence  LVWTSGPAGEGSYSIT
Template Known Secondary structure 


SSS


S
Template Predicted Secondary structure 













Template SS confidence 















   52.......60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions