Return to main results Retrieve Phyre Job Id

Job DescriptionP12994
Confidence99.77%DateThu Jan 5 11:33:12 GMT 2012
Rank6Aligned Residues103
% Identity23%Templatec2r77A_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:phosphatidylethanolamine-binding protein, putative; PDBTitle: crystal structure of phosphatidylethanolamine-binding protein,2 pfl0955c, from plasmodium falciparum
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. .. ......40.........50........ .60.........70.
Predicted Secondary structure 






















.......
.












.....





Query SS confidence 


























. . . . . . .

.
























. . . . .












Query Sequence  SNDLRDGDKLPHRHVFNGMGYDGDNIS. . . . . . . PH. LAWDDVPAGTKSFVVTCYDPDAPTG. . . . . SGWWHWVVVNLPA
Query Conservation 
  
  
  

   
       
 
 
.......
 .
 
   
  


 


  




  .....    


  


 
Alig confidence 


























.......

.
























.....












Template Conservation     
 
   
 
 
     
  

 
        
              




 





          



 


 
Template Sequence  NDKIDLNVDLFISFKAGKEVNHGNVLDIAGTGSVPRNIKFSEEPPDGYCFVLFMVDPDYPSRLRPDGKEYIHWVVSGIKT
Template Known Secondary structure  SS






TT

SS
B

GGG
SS

SSS


TTS
TTSTT

S
Template Predicted Secondary structure 












































Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   72.......80.........90.........100.........110.. .......120..
Predicted Secondary structure 




































.
Query SS confidence 








































.









Query Sequence  DTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGE. THRYIFTVHA
Query Conservation      
  
          
  

 
  
  

 

 

 
 . 


 
 


Alig confidence 















...............









.









Template Conservation            
     ...............
  
 

 


 






  
Template Sequence  KELIKGTQKNCVTILP. . . . . . . . . . . . . . . YVGPSIKKGTGLHRISFIISL
Template Known Secondary structure  STTB
TT

...............






TTS

B

Template Predicted Secondary structure 












...............












Template SS confidence 



















































   117..120.........130.. .......140.........150...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions