Job Description P12994 Confidence 100.00% Date Thu Jan 5 11:33:12 GMT 2012 Rank 4 Aligned Residues 154 % Identity 22% Template c2evvD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical protein hp0218; PDBTitle: crystal structure of the pebp-like protein of unknown function hp02182 from helicobacter pylori Resolution 2.59 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.	.	.	.																																	.	.
Query SS confidence																										.	.	.	.	.																																	.	.
Query Sequence		M	K	L	I	S	N	D	L	R	D	G	D	K	L	P	H	R	H	V	F	N	G	M	G	.	.	.	.	.	Y	D	G	D	N	I	S	P	H	L	A	W	D	D	V	P	A	G	T	K	S	F	V	V	T	C	Y	D	P	D	A	P	.	.	T	G	S	G	W	W	H	W	V	V	V	N	L	P	A	D	T
Query Conservation																										.	.	.	.	.																																	.	.
Alig confidence													.													.	.	.	.	.																	.																.	.
Template Conservation													.																																		.
Template Sequence		F	E	V	X	I	Q	T	D	S	K	G	.	Y	L	D	A	K	F	G	G	N	A	P	K	A	F	L	N	S	N	G	L	P	T	Y	S	P	K	I	S	W	Q	K	V	E	.	G	A	Q	S	Y	A	L	E	L	I	D	H	D	A	Q	K	V	C	G	X	P	F	V	H	W	V	V	G	N	I	A	H	N	V
Template Known Secondary structure										T	T	S	.	B			G	G	G	S	T	T	S		G	G	G	S		T	T	S														T	.	T		S									G	G	G					S	S												S	S
Template Predicted Secondary structure													.																																		.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		74	.	.	.	.	.														80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	P	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	G	L	V	A	M	P	D	G	V	L	Q	T	R	T	D	F	G	K	T	G	Y	D	G	A	A	P	P	K	G	E	T	H	R	Y	I	F	T	V	H	A	L	D	I	E	R	I	D	V	D	E	G	A	S	G	A	M	V	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																						.
Template Sequence		L	E	E	N	A	S	X	X	D	K	R	I	V	Q	G	V	N	S	L	T	Q	G	F	I	R	S	P	L	N	E	S	E	K	Q	R	S	N	L	N	N	S	V	Y	I	G	P	X	P	P	N	G	D	.	H	H	Y	L	I	Q	V	Y	A	L	D	I	P	K	L	A	L	K	A	P	F	F	L	G	D	L	H
Template Known Secondary structure				T	T						S	S							T	T		S		S	T	T	S	S	S												T	S	S							S	S	S		.											S	S	S						S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	V	H	F	H	S	L	A	S	A	S	I	T	A	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	X	R	N	H	I	I	A	I	G	R	K	E	F	L	Y
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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