Job Description P12994 Confidence 99.72% Date Thu Jan 5 11:33:12 GMT 2012 Rank 9 Aligned Residues 125 % Identity 22% Template c1wkpA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:flowering locus t protein; PDBTitle: flowering locus t (ft) from arabidopsis thaliana Resolution 2.60 Å

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		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure						.	.																																																									.	.	.	.	.
Query SS confidence						.	.																																																									.	.	.	.	.
Query Sequence		M	K	L	I	.	.	S	N	D	L	R	D	G	D	K	L	P	H	R	H	V	F	N	G	M	G	Y	D	G	D	N	I	S	P	H	L	A	W	D	D	V	P	A	G	T	K	S	F	V	V	T	C	Y	D	P	D	A	P	T	G	S	G	.	.	.	.	.	W	W	H	W	V	V	V	N	L	P	A	D	T
Query Conservation						.	.																																																									.	.	.	.	.
Alig confidence						.	.																	.	.	.	.	.	.	.	.	.										.																						.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.										.
Template Sequence		L	K	V	T	Y	G	Q	R	E	V	T	N	G	L	N	L	R	P	S	Q	V	Q	.	.	.	.	.	.	.	.	.	N	K	P	R	V	E	I	G	G	.	E	D	L	R	N	F	Y	T	L	V	M	V	D	P	D	V	P	S	P	S	N	P	H	L	R	E	Y	L	H	W	L	V	T	D	I	P	A	T	T
Template Known Secondary structure							T	T					T	T					G	G	G	S	S	.	.	.	.	.	.	.	.	.	S									.	S	S	T	T										T	T		S		T	T	S		T	T													T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.										.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		R	V	L	P	Q	G	F	G	S	G	L	V	A	M	P	D	G	V	L	Q	T	R	T	D	F	G	K	T	G	Y	D	G	A	A	P	P	K	G	E	T	H	R	Y	I	F	T	V	H	A	L	D	I	E	R	I	D	V	D	E	G	A	S	G	A	.	.	M	V	G	F	N	V	H	F	H	S	L	A	S	A
Query Conservation																																																																		.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.													.	.														.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.																												.
Template Sequence		G	T	T	F	G	N	E	I	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	N	P	S	P	T	A	G	.	I	H	R	V	V	F	I	L	F	R	Q	L	.	G	R	Q	T	V	Y	A	P	G	W	R	Q	N	F	N	T	R	E	F	A	E	I	Y	N	L	G	L	.
Template Known Secondary structure		B	G	G	G	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	.												S	.	S	S							S	S	S	T	T										T	T			S	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.																												.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.																				.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		152	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	A	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	A	V	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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