Job Description P02921 Confidence 49.94% Date Thu Jan 5 10:57:37 GMT 2012 Rank 7 Aligned Residues 220 % Identity 10% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	H	L	T	L	K	A	I	V	A	L	I	Y	K	N	D	Q	L	S	C	L	L	G	M	A	L	A	Y	N	V	A	S	N	I	I	T	G	F	A	I	Y	Y	F	S	Y	V	I	G	D	A	D	L	F	P	Y	Y	L	S	Y	A	G	A	A	N	L	V	T	L	V	F	F	P	R	L	V	K	S	L	S
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H
Template Known Secondary structure				T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.																													T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		R	R	I	L	W	A	G	A	S	I	L	P	V	L	S	C	G	V	L	L	L	.	M	A	L	M	S	Y	H	N	V	V	L	I	V	I	A	G	I	L	L	N	V	G	T	A	L	F	W	V	L	Q	V	I	M	V	A	D	I	V	D	Y	G	E	Y	K	L	H	V	R	C	E	S	I	A	Y	S	V	Q	T
Query Conservation																							.
Alig confidence																							.																																			.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	.	.	.	.	.	.	.	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G
Template Known Secondary structure		T	T											G	G	G						T	T	T	T	T	T	T		S																												.	.	.	.	.	.	.									T	T						T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		M	V	V	K	G	G	S	A	F	A	A	F	F	I	A	V	V	L	G	M	I	G	Y	V	P	N	V	E	Q	S	T	Q	A	L	L	G	M	Q	F	I	M	I	A	L	P	T	L	F	F	M	V	T	L	I	L	Y	F	R	F	Y	R	L	N	G	.	D	T	L	R	R	I	Q	I	H	L	L	D	K	Y	R
Query Conservation																																																																		.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	G	I	I	G	G	I	V	G	A	V	T	A	.	.	.	.	.	.	.	.	.	.	.	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																				T	S	T	T	S					T	T	S	T	T		G	G	G	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.												360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		453	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	P	P	E	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	P	E	G	N	S
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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