Job Description P02921 Confidence 4.65% Date Thu Jan 5 10:57:37 GMT 2012 Rank 51 Aligned Residues 69 % Identity 16% Template c2kluA_ PDB info PDB header:immune system, membrane protein Chain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4 Resolution UNK

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	N	V	E	Q	S	T	Q	A	L	L	G	M	Q	F	I	M	I	A	L	P	T	L	F	F	M	V	T	L	I	L	Y	F	R	F	Y	R	L	N	G	D	T	L	R	R	I	Q	I	H	L	L	D	K	Y	R	K	V	P	P	E	P	V	H	A	D	I	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	L	V	P	R	G	S	M	A	L	I	V	L	G	G	V	A	G	L	L	L	F	I	G	L	G	I	F	F	S	V	R	S	R	H	R	R	R	Q	A	E	R	M	S	Q	I	K	R	L	L	S	E	K	K	T	S	Q	S	P	H	R	F	Q	K	T	H	S	P
Template Known Secondary structure				S	S				S	S																									S	S			S	S	S		T	T	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions