|   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | W | W | G | R | I | P | F | I | F | Y | L | V | S | M | F | V | G | W | L | E | R | K | R | S | P | L | D | P | V | V | R | S | L | V | S | A | R | I | A | Q | M | C | L | C | E | F | C | V | D | I | T | S | M | K | V | A | E | R | T | G | S | S | D | K | L | L | A | V | A | D | W | R | Q | S | P | L | F | S |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   | . | . |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | N | Y | A | K | A | S | P | E | A | F | K | A | V | M | A | L | E | N | Y | V | Q | . |
. |
S | S | G | L | E | H | R | F | I | H | L | I | K | L | R | A | S | I | I | N | G | C | A | F | C | V | D | M | H | V | K | E | S | R | H | D | G | L | S | E | Q | W | I | N | L | M | S | V | W | R | E | S | P | V | Y | T |
Template Known Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | G | G | G | G | G | G | G |
| T | T | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | E | R | L | A | L | E | Y | A | E | A | A | S | V | . |
T | P | P | T | V | D | D | A | L | R | T | R | L | A | A | H | F | D | A | Q | A | L | T | E | L | T | A | L | I | G | L | Q | N | L | S | A | R | F | N | S | A | M | D | I | P | A |
Query Conservation |   |
  |   |
|   |
|
|
|   |   |
|   |   |   |   |   | . |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
E | Q | E | R | A | L | L | G | W | V | D | A | V | T | K | I | A | E | T | G | A | P | D | D | A | F | E | T | L | R | A | H | F | S | D | E | E | I | V | K | I | T | V | A | I | G | A | I | N | T | W | N | R | I | A | V | G | F | R | S | Q | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |