Job Description P76222 Confidence 5.81% Date Thu Jan 5 12:20:47 GMT 2012 Rank 87 Aligned Residues 42 % Identity 7% Template d1ttya_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution UNK

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	D	P	V	V	R	S	L	V	S	A	R	I	A	Q	M	C	L	C	E	F	C	V	D	I	T	S	M	K	V	A	E	R	T	G	S	S	D	K	L	L	A	V
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		K	T	L	S	P	R	E	A	M	V	L	R	M	R	Y	G	L	L	D	.	.	.	G	K	P	K	T	L	E	E	V	G	Q	Y	F	N	V	T	R	E	R	I	R	Q	I
Template Known Secondary structure		T	T	S													T	T	T	T	.	.	.	S	S												T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions