Job Description P76222 Confidence 7.42% Date Thu Jan 5 12:20:47 GMT 2012 Rank 59 Aligned Residues 40 % Identity 5% Template c3t72o_ PDB info PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex Resolution 4.33 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	P	V	V	R	S	L	V	S	A	R	I	A	Q	M	C	L	C	E	F	C	V	D	I	T	S	M	K	V	A	E	R	T	G	S	S	D	K	L	L	A	V
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	.	.	.	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I
Template Known Secondary structure		S								T	T	T	T	T	S	S	S	S	.	.	.		S												S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.				.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions