Return to main results Retrieve Phyre Job Id

Job DescriptionP76222
Confidence100.00%DateThu Jan 5 12:20:47 GMT 2012
Rank4Aligned Residues169
% Identity14%Templatec3c1lB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative antioxidant defense protein mlr4105; PDBTitle: crystal structure of an antioxidant defense protein (mlr4105) from2 mesorhizobium loti maff303099 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  PLSKIPLILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITS
Query Conservation 
    
   
          
 


     
  
  
 
   
   
      
    



 
 

  
 
 

   
 
Alig confidence 















































































Template Conservation 
                   
 


    
   
  
         
      
     


 
 

  
 
 

   
 
Template Sequence  ASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLXLGESGLSKLDREXIAVAVSSINHCYYCLTAHG
Template Known Secondary structure 





SS

TTT
SS
SS
TT
Template Predicted Secondary structure 
















Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   85....90.........100.........110.........120.........130.........140. ........150.........160...
Predicted Secondary structure 


















.

Query SS confidence 
























































.





















Query Sequence  MKVAERTGSSDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAH. FDAQALTELTALIGLQNLSARF
Query Conservation    
   
     
 

            
 


  
         
 
     
 
 . 

 




   

     

 
Alig confidence 
























































.





















Template Conservation    
   
     
               
 


  
         
       
   
 
  




   
      

 
Template Sequence  AAVRQLSGDPALGEXLVXNFRAADLSPRQTAXLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTAAFFNXSNRV
Template Known Secondary structure  S

GGGS



GGG

TT

Template Predicted Secondary structure 






















Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   164.....170...
Predicted Secondary structure 



Query SS confidence 









Query Sequence  NSAMDIPAQG
Query Conservation    

 
   
Alig confidence 









Template Conservation     

  

 
Template Sequence  AAAIDXRPND
Template Known Secondary structure  T



G
Template Predicted Secondary structure 





Template SS confidence 









   171........180
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions