 |
Job Description | P0A9T0 | Confidence | 98.40% | Date | Thu Jan 5 11:11:17 GMT 2012 |
Rank | 122 | Aligned Residues | 97 |
% Identity | 20% | Template | d1gpja2 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 1.95 |
|
 |
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | R | G | K | K | L | G | I | I | G | Y | G | H | I | G | T | Q | L | G | I | L | A | E | S | L | G | M | Y | . |
V | Y | F | Y | D | I | E | N | K | L | P | L | G | . |
. |
. |
. |
. |
. |
. |
N | A | T | Q | V | Q | H | L | S | D | L | L | N | M | S | D | V | V | S | L | H | V | P | E | N | P | S | T | K | N |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|   | . |
|   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
| . | . | . |
|   |
|   |   |   |
Template Sequence |   |
S | L | H | D | K | T | V | L | V | V | G | A | G | E | M | G | K | T | V | A | K | S | L | V | D | R | G | V | R | A | V | L | V | A | N | R | T | Y | E | R | A | V | E | L | A | R | D | L | G | G | E | A | V | R | F | D | E | L | V | D | H | L | A | R | S | D | V | V | V | S | A | . |
. |
. |
T | A | A | P | H | P |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
|
| G | G | G |  |  |  |  |  |  | T |
| S |  |  |  |  |
| . | . | . |
| S | S | S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
. | . | . | . | . | 240 |
  |
  |   |
220 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | M | G | A | K | E | I | S | L | M | . |
. |
. |
. |
. |
. |
K | P | G | S | L | L | I | N | A | S | R | G | T | V | V | D | I | P |
Query Conservation |   |
|
|   |   |   |   |
|   |   |
| . | . | . | . | . | . |
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|   |   |   |
Template Sequence |   |
V | I | H | V | D | D | V | R | E | A | L | R | K | R | D | R | R | S | P | I | L | I | I | D | I | A | N | P | R | D | V | E | E | G |
Template Known Secondary structure |   |
| B |
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |
|
| S | S |
| S | B |
| T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|