Job Description P0A9T0 Confidence 96.11% Date Thu Jan 5 11:11:17 GMT 2012 Rank 366 Aligned Residues 106 % Identity 16% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I	L	A	E	S	L	G	M	.	.	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	T	Q	V	Q	H	L
Query Conservation																																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	D	K	L	I	G	H	L	A	T	S	Q	E	P	R	S	Y	N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D
Template Known Secondary structure											S								S	S								S												T	T	T			S							S															T	G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.												.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		S	D	L	L	N	M	S	D	V	V	S	L	H	V	.	.	.	.	.	.	.	.	.	.	.	P	E	N	P	S	T	K	N	M	M	.	.	G	A	K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S
Query Conservation																.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		Y	S	V	S	A	G	S	K	L	V	V	I	T	A	G	A	R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S
Template Known Secondary structure		G	G	G	G	T	T		S												T	T																										T	T							S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions