 |
Job Description | P0A9T0 | Confidence | 96.36% | Date | Thu Jan 5 11:11:17 GMT 2012 |
Rank | 339 | Aligned Residues | 67 |
% Identity | 12% | Template | c3o8qB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; |
PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae
|
Resolution | 1.45 Å |
|
 |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | E | A | R | G | K | K | L | G | I | I | G | Y | G | H | I | G | T | Q | L | G | I | L | A | E | S | L | G | M | . |
Y | V | Y | F | Y | D | I | E | N | K | L | P | L | G | . |
. |
. |
. |
. |
. |
. |
. |
N | A | T | Q | V | Q | H | L | S | D | L | L | N | M | S | D | V | V | S | L | H | V | P |
Query Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |
|
|
|
| . |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |
Template Sequence |   |
Q | V | L | L | K | G | A | T | I | L | L | I | G | A | G | G | A | A | R | G | V | L | K | P | L | L | D | Q | Q | P | A | S | I | T | V | T | N | R | T | F | A | K | A | E | Q | L | A | E | L | V | A | A | Y | G | E | V | K | A | Q | A | F | E | Q | L | K | Q | S | Y | D | V | I | I | N | S | T | S |
Template Known Secondary structure |   |
T |
|
|
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | G | G | G | S |
|  |  |  |  |  | G | G | G |
|
| S |
|
| S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|