Job Description P0A9T0 Confidence 100.00% Date Thu Jan 5 11:11:17 GMT 2012 Rank 8 Aligned Residues 313 % Identity 27% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																																						.	.
Query SS confidence														.																																						.	.
Query Sequence		K	F	L	L	V	E	G	V	H	Q	K	A	.	L	E	S	L	R	A	A	G	Y	T	N	I	E	F	H	K	G	A	L	D	D	E	Q	L	K	E	S	I	R	D	A	H	F	I	G	L	R	.	.	S	R	T	H	L	T	E	D	V	I	N	A	A	E	K	L	V	A	I	G	C	F	C	I	G	T	N	Q
Query Conservation														.																																						.	.
Alig confidence														.																																						.	.
Template Conservation
Template Sequence		P	N	F	L	G	C	V	E	N	A	L	G	I	R	D	W	L	E	S	Q	G	H	Q	Y	I	V	T	D	D	K	E	G	P	D	C	E	L	E	K	H	I	P	D	L	H	V	L	I	S	T	P	F	H	P	A	Y	V	T	A	E	R	I	K	K	A	K	N	L	K	L	L	L	T	A	G	I	G	S	D	H
Template Known Secondary structure		T	T		T	T	B	T	T	T	G	G	G								T	T							S			S	S	T	T	S						T	T	T		S						T	T	S				B									T	T							S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		V	D	L	D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	.	.	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		I	D	L	Q	A	A	A	A	A	G	L	T	V	A	E	V	T	G	S	N	V	V	S	V	A	E	D	E	L	M	R	I	L	I	L	M	R	N	F	V	P	G	Y	N	Q	V	V	K	G	E	W	N	V	A	G	I	A	Y	R	A	Y	D	L	E	G	K	T	I	G	T	V	G	A	G	R	I	G	K	L	L
Template Known Secondary structure		B									T							T	T	S	S																	T	T										T	T				T					T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		G	I	L	A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	.	.	.	.	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	M	M	G	A	K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	R	G	T
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.
Template Conservation
Template Sequence		L	Q	R	L	K	P	F	G	C	N	L	L	Y	H	D	R	L	Q	M	A	P	E	L	E	K	E	T	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I	N	M	P	L	T	E	K	T	R	G	M	F	N	K	E	L	I	G	K	L	K	K	G	V	L	I	V	N	N	A	R	G	A
Template Known Secondary structure						G	G	G									S	S											T					S	S					G	G	G		S						S				T	T	T	T	T		B							T	S		T	T							S		G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	S	T	Q	E	A	Q	E	N	I	G	L	E	V	A	G	K	L	I	K	Y	S	D	N	G	S	T	L
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		I	M	E	R	Q	A	V	V	D	A	V	E	S	G	H	I	G	G	Y	S	G	D	V	W	D	P	Q	P	A	.	.	.	.	P	K	D	H	P	W	R	Y	M	P	N	Q	A	M	T	P	H	T	S	G	T	T	I	D	A	Q	L	R	Y	A	A	G	T	K	D	M	L	E	R	Y	F	K	G	E	D	F	P
Template Known Secondary structure		G	B												T	S							S			S	S	S	S		.	.	.	.		T	T		G	G	G	T	S	T	T					S	S		G	G	G	S																				T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
				323	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	A	V	N	F	P
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	E	N	Y	I	V	K	D
Template Known Secondary structure		G	G	G					T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions