 |
| Job Description | P0A9T0 | | Confidence | 96.66% | Date | Thu Jan 5 11:11:17 GMT 2012 |
| Rank | 303 | Aligned Residues | 63 |
| % Identity | 22% | Template | c3ketA_ |
| PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; |
PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator
|
| Resolution | 2.40 Å |
|
| | |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
. | . | . | . | . | . | 210 | . | . |
| Predicted Secondary structure | |
|
|
|  | | | |  |
|
|
|  | | | | | | | | . | . | | | | |
|
|
| | | | | . | |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| | |
|
| | | | | |
|
| . | . |
|
| | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | G | K | K | L | G | I | I | G | Y | G | H | I | G | T | Q | L | G | I | . |
. |
L | A | E | S | L | G | M | Y | V | Y | F | . |
Y | D | I | E | N | K | L | P | L | G | . |
. |
. |
. |
. |
. |
. |
N | A | T | Q | V | Q | H | L | S | D | L | L | N | M | . |
. |
S | D | V | V | S | L | H | V | P |
| Query Conservation | |
|
|
|
|
|
|
|
|
| |
| |
|
| | |
|
| | . | . | | | |
|
|
|
| |
| | | . |
|
| | | | | | | | | . | . | . | . | . | . | . | | | | | | | |
| |
|
|
| | | . | . |
|
|
|
|
|
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | |
| |
|
|
|
|
| |
|
| |
|
|
| | | | | | | | |
| | |
|
|
| |
|
| |
|
| |
| | | | | | | | |
| | |
| | | | |
|
| |
| |
| | | | |
|
| |
|
|
|
|
|
|
| Template Sequence | |
S | T | T | N | V | M | L | V | G | C | G | N | I | G | R | A | L | L | H | Y | R | F | H | D | R | N | K | M | Q | I | S | M | A | F | D | L | D | S | N | D | L | V | G | K | T | T | E | D | G | I | P | V | Y | G | I | S | T | I | N | D | H | L | I | D | S | D | I | E | T | A | I | L | T | V | P |
| Template Known Secondary structure | |
S |
| | | | | | |
|
| S | | | | | | | | T | S |
| G | G | G | T | S | S | | | | | | | | |
| T | T | S | T | T | T | T | S | B |
| T | T | S |
| B | | | | G | G | G | | | | | T | S | S | S |
|
|
| | | | |
| S |
|
| Template Predicted Secondary structure | |
|
| | | | | | |
|
|
| | | | | | | | | | | |
|
|
|
|
|
| | | | | | | |
|
| | | | | |
|
|
| | |
|
|
|
|
|
|
| | | | | | | | | | |
|
|
|
| | | | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
