Job Description P0A9T0 Confidence 100.00% Date Thu Jan 5 11:11:17 GMT 2012 Rank 28 Aligned Residues 278 % Identity 20% Template c3gvxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerate dehydrogenase related protein; PDBTitle: crystal structure of glycerate dehydrogenase related2 protein from thermoplasma acidophilum Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		I	K	F	L	L	V	E	G	V	H	Q	K	A	L	E	S	L	R	A	.	.	A	G	Y	T	N	I	E	F	H	K	G	A	L	D	D	E	Q	L	K	E	S	I	R	D	A	H	F	I	G	L	R	S	R	T	H	L	T	E	D	V	I	N	A	A	E	K	L	V	A	I	G	C	F	C	I	G	T	N	Q
Query Conservation																					.	.
Alig confidence																					.	.									.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		L	D	V	Y	V	N	F	P	A	D	G	H	V	R	E	I	A	K	T	V	L	D	G	F	D	L	H	W	Y	.	.	.	.	.	.	.	.	.	.	.	P	D	Y	Y	D	A	E	A	Q	V	I	K	.	.	.	.	.	.	.	D	R	Y	V	L	G	K	R	T	K	X	I	Q	A	I	S	A	G	V	D	H
Template Known Secondary structure								S														T	T	T	S					T	.	.	.	.	.	.	.	.	.	.	.	T	S					S					S	.	.	.	.	.	.	.	S						S	S								S	S			T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.												30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I
Query Conservation
Alig confidence													.																																										.	.
Template Conservation													.																																										.	.
Template Sequence		I	D	V	N	G	I	P	E	N	V	V	.	L	C	S	N	A	G	A	Y	S	I	S	V	A	E	H	A	F	A	L	L	L	A	H	A	K	N	I	L	E	N	N	E	L	X	K	A	G	I	F	R	Q	.	.	S	P	T	T	L	L	Y	G	K	A	L	G	I	L	G	Y	G	G	I	G	R	R	V	A	H
Template Known Secondary structure		S		G	G	G	S		T	T	S		.																									T	T										T	T					.	.							T	T									S
Template Predicted Secondary structure													.																																										.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	M	M	G	A	K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	R	G	T	V	V	D	I	P	A
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		L	A	K	A	F	G	X	R	V	I	A	Y	T	R	S	S	V	D	.	Q	N	V	D	V	I	S	E	S	P	A	D	L	F	R	Q	S	D	F	V	L	I	A	I	P	L	T	D	K	T	R	G	X	V	N	S	R	L	L	A	N	A	R	K	N	L	T	I	V	N	V	A	R	A	D	V	V	S	K	P	D
Template Known Secondary structure							T								S	S				.	T	T		S				S	S									S										T	T	T	T	T		B	S					T	T			T	T							S		G	G	G	B
Template Predicted Secondary structure																				.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	S	.	T	Q	E	A	Q	E	N	I	G	L	E	V	A	G	K	L	I	K	Y	S	D
Query Conservation																																																		.
Alig confidence																									.	.	.	.							.	.	.													.
Template Conservation																									.	.	.	.							.	.	.
Template Sequence		X	I	G	F	L	K	E	R	S	D	V	W	Y	L	S	D	V	W	W	N	E	P	E	.	.	.	.	I	T	E	T	N	L	.	.	.	R	N	A	I	L	S	P	H	V	A	G	G	X	S	G	E	I	X	D	I	A	I	Q	L	A	F	E	N	V	R	N	F	F	E
Template Known Secondary structure										T	T						S			T	T	T	T	S	.	.	.	.			S				.	.	.	S	S						S		S	S		B	T	T	B																	T
Template Predicted Secondary structure																									.	.	.	.							.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions