Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9T0
Confidence96.78%DateThu Jan 5 11:11:17 GMT 2012
Rank287Aligned Residues112
% Identity13%Templatec3donA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170..... ....180......... 190.........200.........210.........
Predicted Secondary structure 












.








.....













Query SS confidence 





























.













. . . . .





























Query Sequence  SFEARGKKLGIIGYGHIGTQLGILAESLGM. YVYFYDIENKLPLG. . . . . NATQVQHLSDLLNMSDVVSLHVPENPSTKN
Query Conservation 
 

 







 
 

  

    



. 
  

        .....       
 


  






 


  
  
Alig confidence 





























.













.....























.....
Template Conservation        
 







 
 

   
   
   
 
 


  

  

              
   







 .....
Template Sequence  YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPD. . . . . S
Template Known Secondary structure  STTGGG



STT

S


S
GGGGTT

S


TGGG
S



.....
Template Predicted Secondary structure 



























.....
Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170.........180..... .
 
   220.........230.........240.........250.........260......
Predicted Secondary structure 



















Query SS confidence 














































Query Sequence  MMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVF
Query Conservation 

    
  

 

 


 


 



 

  

 

 
 






Alig confidence 




...















.





















Template Conservation   
   ... 
     
 

 
 
 . 
 

  
   
   
 

 

Template Sequence  VISLN. . . RLASHTLVSDIVYNPY. KTPILIEAEQRGNPIYNGLDMF
Template Known Secondary structure  SS

T...T

SS
S

SSS.S
TT


T
Template Predicted Secondary structure 


...







.






Template SS confidence 














































   194.... .200.........210.... .....220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions