Job Description P0A9T0 Confidence 100.00% Date Thu Jan 5 11:11:17 GMT 2012 Rank 22 Aligned Residues 318 % Identity 25% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.		.	.
Predicted Secondary structure									.	.	.																												.	.	.																			.	.	.	.	.	.														.
Query SS confidence									.	.	.																												.	.	.																			.	.	.	.	.	.														.
Query Sequence		K	I	K	F	L	L	V	.	.	.	E	G	V	H	Q	K	A	L	E	S	L	R	A	A	G	Y	T	N	I	E	F	H	K	G	A	L	D	.	.	.	D	E	Q	L	K	E	S	I	R	D	A	H	F	I	G	L	R	S	.	.	.	.	.	.	R	T	H	L	T	E	D	V	I	N	A	A	E	.	K	L
Query Conservation									.	.	.																												.	.	.																			.	.	.	.	.	.														.
Alig confidence									.	.	.															.													.	.	.																			.	.	.	.	.	.														.
Template Conservation																										.
Template Sequence		R	P	R	V	L	L	L	G	D	P	A	R	H	L	D	D	L	W	S	D	F	Q	Q	K	.	F	E	V	I	P	A	N	L	T	T	H	D	G	F	K	Q	A	L	R	E	K	R	Y	G	D	F	E	A	I	I	K	L	A	V	E	N	G	T	E	S	Y	P	W	N	A	D	L	I	S	H	L	P	S	S	L
Template Known Secondary structure									S	S			S	S												.	S																			T	T	T	T				S						S	T	T	T	T	G	G	G			B						T	T	S		T	T
Template Predicted Secondary structure																										.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.
Query Sequence		V	A	I	G	C	F	C	I	G	T	N	Q	V	D	L	D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	.	.	.	.	.	.	.	L	A	A	G	S	F	E	A
Query Conservation																																																																			.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	F	A	A	A	G	A	G	F	D	W	L	D	L	D	A	L	N	E	R	G	V	A	F	A	N	S	R	G	A	G	D	T	A	T	S	D	L	A	L	Y	L	I	L	S	V	F	R	L	A	S	Y	S	E	R	A	A	R	T	G	D	P	E	T	F	N	R	V	H	L	E	I	G	K	S	A	H	N	P
Template Known Secondary structure							S	S	S			T	T	B								T	T							T	T	T	T																		T									T	T														T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																							.																			.	.	.	.
Query SS confidence																							.																			.	.	.	.
Query Sequence		R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I	L	A	.	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	.	.	.	.	G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	M	M	G	A	K
Query Conservation																							.																			.	.	.	.
Alig confidence																							.																			.	.	.	.
Template Conservation
Template Sequence		R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	G	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A
Template Known Secondary structure		T	T	S								S													T	T									S	S											T					S	S									S									S	G	G	G	T	T		B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	R	G	T	V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	S	T	Q	E	A	Q	E	N	I
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		F	F	A	A	M	K	P	G	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G	K	L	L	S	A	G	L	D	V	H	E	F	E	P	.	.	.	.	.	N	V	S	K	E	L	I	E	M	K	H	V	T	L	T	T	H	I	G	G	V	A	I	E	T	F	H	E	F
Template Known Secondary structure						S		T	T							S		G	G	G	B											T	T	S							S	S		T	T	T	T	.	.	.	.	.	S							T	S	S	S					S	S		T	T		S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	V	A	G	K	L	I	K	Y	S	D	N	G	S	T	L	S	A	V	N	F	P	E	V	S	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	T	M	T	N	I	D	R	F	L	L	Q	G	K	P	L	L	T	P	A	G	K	V	F	A	P	S
Template Known Secondary structure															T					S	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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