Job Description P0A9T0 Confidence 99.97% Date Thu Jan 5 11:11:17 GMT 2012 Rank 43 Aligned Residues 251 % Identity 15% Template c2bruB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase subunit alpha; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase Resolution UNK

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																								.	.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		G	V	H	Q	K	A	L	E	S	L	R	A	A	G	Y	T	N	I	E	F	H	K	.	.	.	.	G	A	L	D	D	E	Q	L	.	.	.	.	.	.	.	.	.	K	E	S	I	R	D	A	H	F	I	G	L	R	S	R	T	H	L	T	E	D	V	I	N	A	A	E	K	L	V	A	I	G	C	F	C	I
Query Conservation																								.	.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.									.	.	.	.	.	.	.	.	.																.
Template Conservation																																																												.
Template Sequence		A	A	T	P	K	T	V	E	Q	L	L	K	L	G	F	T	V	A	V	E	S	G	A	G	Q	L	A	S	F	D	D	K	A	F	V	Q	A	G	A	E	I	V	E	G	N	S	V	W	Q	S	E	I	I	L	K	V	N	A	.	P	L	D	D	E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P
Template Known Secondary structure		S												T	T							T	T					T	T	S		S							T						S	G	G	G	G	S	S	S					S	S		.											S										T
Template Predicted Secondary structure																																																												.
Template SS confidence
		1017	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.		.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																	.	.																																	.
Query SS confidence																																	.	.																																	.
Query Sequence		G	T	N	Q	V	D	L	D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	.	.	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	.	E	A	R	G	K	K	L	G	I	I	G	Y	G	H
Query Conservation																																	.	.																																	.
Alig confidence																																	.	.																																	.
Template Conservation
Template Sequence		A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y	R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V
Template Known Secondary structure		T	T											T	T						S	S					S																													S	S		S	S			B		S	S		B										S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1096	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		I	G	T	Q	L	G	I	L	A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	.	T	K	N	M	M	G	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R
Template Known Secondary structure														T								S	S	T									T	T										T	T																	S								B	T	T	B						B
Template Predicted Secondary structure
Template SS confidence
		1176	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																			.
Query SS confidence																		.	.																			.
Query Sequence		K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	.	.	R	G	T	V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	.	L	A	G	A	A	I	D	V	F	P	T	E
Query Conservation																		.	.																			.
Alig confidence																		.	.																			.
Template Conservation
Template Sequence		E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T	T	E	N	G	V	K	V	I	G	Y	T	D	L	P	G	R
Template Known Secondary structure					T	T	S		S	S						S	T	T	T	T	T		S	B	S	S			T	T	S					S	S	S							T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions