Job Description P0A9T0 Confidence 100.00% Date Thu Jan 5 11:11:17 GMT 2012 Rank 25 Aligned Residues 292 % Identity 20% Template c1qp8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	L	L	V	E	G	V	H	Q	K	A	L	E	S	L	R	A	A	G	Y	T	N	I	E	F	H	K	G	A	L	D	D	E	Q	L	K	E	S	I	R	D	A	H	F	I	G	L	R	S	R	T	H	L	T	E	D	V	I	N	A	A	E	K	L	V	A	I	G	C	F	C	I	G	T	N	Q	V	D	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		E	L	Y	V	N	F	E	L	P	P	E	A	E	E	E	L	R	K	Y	F	K	I	V	R	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	L	G	N	V	E	A	A	L	V	.	.	.	S	R	I	T	A	E	E	L	A	K	X	P	R	L	K	F	I	Q	V	V	T	A	G	L	D	H	L	P	W
Template Known Secondary structure							S												T	T						S	S		.	.	.	.	.	.	.	.	.	.	.	.		T	T	B					B	.	.	.	S											T	T						B	S	S	S			T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.													.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I	L	A	E
Query Conservation
Alig confidence					.																																															.
Template Conservation					.																																															.
Template Sequence		E	S	I	.	P	P	H	V	T	V	A	G	N	A	G	S	N	A	D	A	V	A	E	F	A	L	A	L	L	L	A	P	Y	K	R	I	I	Q	Y	G	E	K	X	K	R	G	D	Y	G	R	.	D	V	E	I	P	L	I	Q	G	E	K	V	A	V	L	G	L	G	E	I	G	T	R	V	G	K	I	L	A
Template Known Secondary structure		T	T	S	.		T	T	S							S	S	S																	T	T										T	T					.		S						T	T							S		S	T
Template Predicted Secondary structure					.																																															.
Template SS confidence
		67	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	M	M	G	A	K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	R	G	T	V	V	D	I	P	A	L	C	D
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		A	L	G	A	Q	V	R	G	F	S	R	T	P	K	E	G	.	.	P	W	R	F	T	N	S	L	E	E	A	L	R	E	A	R	A	A	V	C	A	L	P	L	N	K	H	T	R	G	L	V	K	Y	Q	H	L	A	L	X	A	E	D	A	V	F	V	N	V	G	R	A	E	V	L	D	R	D	G	V	L	R
Template Known Secondary structure			T	T								S	S				S	.	.	S	S			B	S		S					T	T		S									S	T	T	T	T	T		B						T	T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure																		.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																				.																											.	.
Query SS confidence																				.																											.	.
Query Sequence		A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	.	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	.	.	S	T	Q	E	A	Q	E	N	I	G	L	E	V	A	G	K	L	I	K	Y	S	D	N	G	S	T	L	S	A	V	N
Query Conservation																				.																											.	.
Alig confidence																				.			.	.	.	.																					.	.
Template Conservation																							.	.	.	.
Template Sequence		I	L	K	E	R	P	Q	F	I	F	A	S	D	V	W	W	G	R	N	D	F	.	.	.	.	A	K	D	A	E	F	F	S	L	P	N	V	V	A	T	P	W	V	A	G	G	Y	G	N	E	R	V	W	R	Q	X	V	X	E	A	V	R	N	L	I	T	Y	A	T	G	G	R	P	R	N	I	A	K
Template Known Secondary structure							T	T						S			T	T	T	T			.	.	.	.	G	G	G					T	S	T	T						S		S	S	S	S	S																					T	T	S			S		B
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions