Job Description P0A9T0 Confidence 99.98% Date Thu Jan 5 11:11:17 GMT 2012 Rank 41 Aligned Residues 283 % Identity 17% Template c1pjcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad Resolution 2.00 Å

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		11	.	.	.	.	.	.										.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	F	L	L	V	E	.	.	.	.	.	.	.	.	.	G	V	H	Q	K	A	L	E	S	L	R	A	A	G	Y	T	N	I	E	F	H	K	.	.	.	.	G	A	L	D	D	E	Q	L	K	.	.	.	.	.	.	.	.	.	.	E	S	I	R	D	A	H	F	I	G	L	R	S	R	T	H	L	T	E
Query Conservation									.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																							.	.	.	.										.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																													.
Template Sequence		M	E	I	G	V	P	K	E	I	K	N	Q	E	F	R	V	G	L	S	P	S	S	V	R	T	L	V	E	A	G	H	T	V	F	I	E	T	Q	A	G	I	G	A	G	F	A	D	Q	D	Y	V	Q	A	G	A	Q	V	V	P	S	A	K	D	A	W	S	R	E	M	V	V	K	V	K	E	.	P	L	P	A
Template Known Secondary structure											S	T	T					S											T	T	T							T	T	T	T	G	G	G	T										T					S	S						T	S	S					S	S		.			G	G
Template Predicted Secondary structure																																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	I	N	A	A	E	K	L	V	A	I	G	C	F	C	I	G	T	N	Q	V	D	L	D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	D	L	M	Q	K	D	Q	L	L	F	T	Y	L	H	L	A	A	A	R	E	L	T	E	Q	L	M	R	V	G	L	T	A	I	A	Y	E	T	V	E	L	P	N	R	S	L	P	L	L	T	P	M	S	I	I	A	G	R	L	S	V	Q	F	G	A	R	F	L	E	R	Q	Q	G	G	R	G	V	L	L
Template Known Secondary structure		G	G	G	G			T	T									G	G	G												T						G	G	G				T	T	S			T	T	T																			T	S	G	G	G	T	S					T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
						148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		.	.	.	.	E	A	R	G	K	K	L	G	I	I	G	Y	G	H	I	G	T	Q	L	G	I	L	A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	.	.	.	.	.	.	.	.	.	.	.	P	L	G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	.
Query Conservation		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		G	G	V	P	G	V	K	P	G	K	V	V	I	L	G	G	G	V	V	G	T	E	A	A	K	M	A	V	G	L	G	A	Q	V	Q	I	F	D	I	N	V	E	R	L	S	Y	L	E	T	L	F	G	S	R	V	E	L	L	Y	S	N	S	A	E	I	E	T	A	V	A	E	A	D	L	L	I	G	A	V	L
Template Known Secondary structure		T		B	T	T	B											S													T	T								S													G	G	G	S																T		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		P	E	N	P	S	T	K	N	M	M	G	A	K	E	I	S	L	M	K	P	G	S	L	L	I	N	A	S	.	.	R	G	T	V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T	E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L
Query Conservation																														.	.
Alig confidence																														.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Sequence		V	P	G	R	R	A	P	I	L	V	P	A	S	L	V	E	Q	M	R	T	G	S	V	I	V	D	V	A	V	D	Q	G	G	C	V	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	T	.	.	.	.	S	H	T	Q	P	T	Y	E	V	F	G	V	V	H
Template Known Secondary structure			T	T	S	S					B						T	T	S		T	T						T	T		T	T			S	B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.		S	S	S						T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.																						.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.
				290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.									.
Query SS confidence		.	.									.
Query Sequence		.	.	T	P	H	I	G	G	S	T	.	Q	E	A	Q	E	N	I	G	L	E	V	A	G	K	L	I	K	Y	S	D	N	G
Query Conservation		.	.									.
Alig confidence		.	.									.
Template Conservation
Template Sequence		Y	G	V	P	N	M	P	G	A	V	P	W	T	A	T	Q	A	L	N	N	S	T	L	P	Y	V	V	K	L	A	N	Q	G
Template Known Secondary structure					S		G	G	G	G																								G
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions