Job Description P0A9T0 Confidence 97.21% Date Thu Jan 5 11:11:17 GMT 2012 Rank 231 Aligned Residues 138 % Identity 18% Template c1ortD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa Resolution 3.00 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		D	A	A	A	K	R	G	I	P	V	F	N	A	P	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	G	.	.	H	I	G	T	Q	L	G	I	L
Query Conservation																																																																							.	.
Alig confidence																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	K	F	A	G	V	P	V	F	N	G	L	T	D	E	Y	H	P	T	Q	.	.	M	L	A	D	V	L	T	M	R	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	K	P	L	H	D	I	S	Y	A	Y	L	G	D	A	R	N	N	M	G	N	S	L	L	L	I
Template Known Secondary structure							S	S	S								S	S						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		G	G	G							S		S		S	T
Template Predicted Secondary structure																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.																			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.														220	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	K	L	G	M	D	V	R	I	A	A	P	K	A	L	W	P	H	D	E	F	V	A	Q	C	K	K	F	A	E	E	S	G	A	K	L	T	L	T	E	D	P	K	E	A	V	K	G	V	D	F	V	H	T	D	V	W	V	S	M	G	E	P	V	E	A	W	G	E	R	I	K	E	L	L	P	Y	Q	V
Template Known Secondary structure						T									G	G	G	S																T	T							S						T	T	T		S								S		T	T	S		S	S										G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		222	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.																							240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	K	E	I	.	S	L	M	K	P	G	S	L	L	I	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	T	V	V	D	I	P	A	L
Query Conservation							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	M	E	I	M	K	A	T	G	N	P	R	A	K	F	M	H	C	L	P	A	F	H	N	S	E	T	K	V	G	K	Q	I	A	E	Q	Y	P	N	L	A	N	G	I	E	V	T	E	D	V	F
Template Known Secondary structure									S	S		T	T							S					S	S	S	S	S										T	T	S	S	S		S	S	B
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions