Job Description P0A9T0 Confidence 97.00% Date Thu Jan 5 11:11:17 GMT 2012 Rank 257 Aligned Residues 126 % Identity 21% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																							.	.	.
Query SS confidence																.																																																							.	.	.
Query Sequence		D	A	A	A	K	R	G	I	P	V	F	N	A	P	.	F	S	N	T	R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	Y	.	.	.	G	H	I	G	T	Q	L	G
Query Conservation																.																																																							.	.	.
Alig confidence																.									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	E	V	A	E	V	P	V	I	N	A	G	D	G	S	N	Q	H	P	T	Q	.	.	T	L	L	D	L	Y	T	I	K	K	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	D	G	L	K	I	G	L	L	G	D	L	K	Y	G	R	T	V	H	S	L	A
Template Known Secondary structure						T		S	S								T	T	S						.	.												S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S	S							S		T	T	T
Template Predicted Secondary structure																									.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150																				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.											.	220	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																			.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																			.												.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	A	E	S	L	G	M	Y	V	Y	F	Y	D	I	E	N	K	L	P	L	G	.	.	.	.	.	.	.	.	.	.	.	N	A	T	Q	V	Q	H	L	S	D	L	L	N	M	S	D	V	V	.	S	L	H	V	P	E	N	P	S	T	K	.	.	.	.	.	.	.	.	.	.	N	M	M	G	A	K	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																			.												.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																			.												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	T	F	Y	D	V	E	L	Y	L	I	S	P	E	L	L	R	M	P	R	H	I	V	E	E	L	R	E	K	G	M	K	V	V	E	T	T	T	L	E	D	V	I	G	K	L	D	V	L	Y	V	T	R	I	Q	K	E	R	F	P	D	E	Q	E	Y	L	K	V	K	G	S	Y	Q	V	N	L	K	V
Template Known Secondary structure				G	G	G	S										G	G	G													T	T							S		T					T	T		S									G	G	G	S	S	S						T	T	T	T				B		T	T	G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	M	K	P	G	S	L	L	I	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	A	K	D	E	L	R	I	M	H	P
Template Known Secondary structure		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions