 |
Job Description | P77381 | Confidence | 21.35% | Date | Thu Jan 5 12:28:25 GMT 2012 |
Rank | 66 | Aligned Residues | 83 |
% Identity | 17% | Template | c3rkvA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:putative peptidylprolyl isomerase; |
PDBTitle: c-terminal domain of protein c56c10.10, a putative peptidylprolyl2 isomerase, from caenorhabditis elegans
|
Resolution | 2.41 Å |
|
 |
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
. | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | D | A | K | L | H | R | N | L | L | R | W | Y | S | A | G | R | L | D | I | P | E | L | L | D | Y | A | Q | S | W | R | E | T | E | P | D | N | E | D | A | P | Y | Y | E | Y | A | Q | R | V | Y | C | G | E | G | E | S | L | L | A | E | L | C | D | Y | W | R | E | Y | P | . |
S | T | Q | A | D | A | L | M | L |
Query Conservation |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
| . |   |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | K | N | I | P | L | Y | A | N | M | S | Q | C | Y | L | N | I | G | . |
D | L | H | E | A | E | E | T | S | S | E | V | L | K | R | E | E | T | N | E | K | A | L | F | R | R | A | K | A | R | I | A | A | W | K | L | D | E | A | E | E | D | L | K | L | L | L | R | N | H | P | A | A | A | S | V | V | A | R | E | M |
Template Known Secondary structure |   |
 | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
  |
  |   |
292 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
Q | W | C | R | Q |
Query Conservation |   |
  |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
Template Sequence |   |
K | I | V | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
319 | 320 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|