Job Description P77381 Confidence 15.85% Date Thu Jan 5 12:28:25 GMT 2012 Rank 79 Aligned Residues 70 % Identity 6% Template c3mv3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 3.25 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		P	D	D	A	K	L	H	R	N	L	L	R	W	Y	S	A	G	R	L	D	I	P	E	L	L	D	Y	A	Q	S	W	R	E	T	.	.	E	P	D	N	E	D	A	P	Y	Y	E	Y	A	Q	R	V	Y	C	G	E	G	E	S	L	L	A	E	L	C	D	Y	W	R	E	Y	P	S
Query Conservation																																				.	.
Alig confidence																				.																.	.
Template Conservation																				.
Template Sequence		Q	N	S	P	Y	E	L	Y	L	L	A	T	A	Q	A	I	L	G	.	D	L	D	K	S	L	E	T	C	V	E	G	I	D	N	D	E	A	E	G	T	T	E	L	L	L	L	A	I	E	V	A	L	L	N	N	N	V	S	T	A	S	T	I	F	D	N	Y	T	N	A	I	E	D
Template Known Secondary structure																			T	.														T	T	T	T	S	S	S															T	T														T	T		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions